STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW33492.1Phage conserved hypothetical protein. (81 aa)    
Predicted Functional Partners:
SDW33463.1
Phage tail tube protein, GTA-gp10.
 
     0.931
SDW33527.1
Phage tail tape measure protein, lambda family.
 
     0.911
SDW33432.1
Phage major tail protein, TP901-1 family.
 
     0.879
SDW33400.1
Protein of unknown function.
 
     0.859
SDW33598.1
Phage conserved hypothetical protein BR0599.
 
     0.846
SDW33627.1
Putative phage cell wall peptidase, NlpC/P60 family.
 
     0.824
SDW33565.1
TIGR02217 family protein.
 
     0.823
SDW33668.1
Putative phage tail protein.
 
 
   0.807
SDW33329.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
     0.800
SDW33365.1
Phage head-tail adaptor, putative, SPP1 family.
 
     0.769
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.