STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW59884.1Cytochrome c oxidase accessory protein FixG. (473 aa)    
Predicted Functional Partners:
SDW18525.1
Hypothetical protein.
   
    0.999
SDW59959.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.999
SDW59996.1
Cytochrome c oxidase cbb3-type subunit 4.
 
  
 0.999
SDW60034.1
Cytochrome c oxidase cbb3-type subunit 2.
 
  
 0.999
SDW60072.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.996
SDW59847.1
Nitrogen fixation protein FixH.
 
  
 0.993
SDW59815.1
Cu2+-exporting ATPase.
 
  
 0.976
SDX26974.1
Hypothetical protein.
   
    0.961
SDW59780.1
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.917
SDW60143.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.864
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.