STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW60627.1Glyoxylase, beta-lactamase superfamily II. (306 aa)    
Predicted Functional Partners:
SDW60665.1
Glyoxylase, beta-lactamase superfamily II.
 
  
  0.899
SDW38474.1
LuxR family transcriptional regulator.
    
   0.797
SDW61091.1
Monoheme cytochrome SoxX (sulfur oxidation).
  
     0.633
SDW60782.1
Protein of unknown function DUF302.
  
     0.627
SDW60546.1
Glyoxylase, beta-lactamase superfamily II.
    
  0.610
SDW60919.1
Sulfur dehydrogenase subunit SoxC.
 
 
  0.598
SDW61193.1
Hypothetical protein.
  
     0.597
SDW60584.1
Sulfate permease, SulP family.
       0.584
SDW60886.1
Sulfur dehydrogenase subunit SoxD.
 
   
 0.558
SDW34928.1
Hypothetical protein.
  
  0.554
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.