Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW63205.1 | SDW63232.1 | SAMN04488001_1400 | SAMN04488001_1401 | Hypothetical protein. | Transcriptional regulator, ArsR family. | 0.944 |
SDW63205.1 | SDW63262.1 | SAMN04488001_1400 | SAMN04488001_1402 | Hypothetical protein. | Uracil-DNA glycosylase. | 0.639 |
SDW63205.1 | SDW63291.1 | SAMN04488001_1400 | SAMN04488001_1403 | Hypothetical protein. | SseB protein N-terminal domain-containing protein. | 0.693 |
SDW63205.1 | SDW93708.1 | SAMN04488001_1400 | SAMN04488001_2035 | Hypothetical protein. | Arsenite transporter, ACR3 family. | 0.422 |
SDW63205.1 | nhaA | SAMN04488001_1400 | SAMN04488001_1399 | Hypothetical protein. | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.584 |
SDW63232.1 | SDW63205.1 | SAMN04488001_1401 | SAMN04488001_1400 | Transcriptional regulator, ArsR family. | Hypothetical protein. | 0.944 |
SDW63232.1 | SDW63262.1 | SAMN04488001_1401 | SAMN04488001_1402 | Transcriptional regulator, ArsR family. | Uracil-DNA glycosylase. | 0.589 |
SDW63232.1 | SDW63291.1 | SAMN04488001_1401 | SAMN04488001_1403 | Transcriptional regulator, ArsR family. | SseB protein N-terminal domain-containing protein. | 0.593 |
SDW63232.1 | SDW93708.1 | SAMN04488001_1401 | SAMN04488001_2035 | Transcriptional regulator, ArsR family. | Arsenite transporter, ACR3 family. | 0.412 |
SDW63232.1 | lspA | SAMN04488001_1401 | SAMN04488001_3374 | Transcriptional regulator, ArsR family. | Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.412 |
SDW63232.1 | nhaA | SAMN04488001_1401 | SAMN04488001_1399 | Transcriptional regulator, ArsR family. | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.585 |
SDW63262.1 | SDW63205.1 | SAMN04488001_1402 | SAMN04488001_1400 | Uracil-DNA glycosylase. | Hypothetical protein. | 0.639 |
SDW63262.1 | SDW63232.1 | SAMN04488001_1402 | SAMN04488001_1401 | Uracil-DNA glycosylase. | Transcriptional regulator, ArsR family. | 0.589 |
SDW63262.1 | SDW63291.1 | SAMN04488001_1402 | SAMN04488001_1403 | Uracil-DNA glycosylase. | SseB protein N-terminal domain-containing protein. | 0.871 |
SDW63262.1 | nhaA | SAMN04488001_1402 | SAMN04488001_1399 | Uracil-DNA glycosylase. | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.529 |
SDW63291.1 | SDW63205.1 | SAMN04488001_1403 | SAMN04488001_1400 | SseB protein N-terminal domain-containing protein. | Hypothetical protein. | 0.693 |
SDW63291.1 | SDW63232.1 | SAMN04488001_1403 | SAMN04488001_1401 | SseB protein N-terminal domain-containing protein. | Transcriptional regulator, ArsR family. | 0.593 |
SDW63291.1 | SDW63262.1 | SAMN04488001_1403 | SAMN04488001_1402 | SseB protein N-terminal domain-containing protein. | Uracil-DNA glycosylase. | 0.871 |
SDW63291.1 | nhaA | SAMN04488001_1403 | SAMN04488001_1399 | SseB protein N-terminal domain-containing protein. | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.531 |
SDW93708.1 | SDW63205.1 | SAMN04488001_2035 | SAMN04488001_1400 | Arsenite transporter, ACR3 family. | Hypothetical protein. | 0.422 |
page 1 of 2