Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW36309.1 | SDW42952.1 | SAMN04488001_0984 | SAMN04488001_1158 | Phytoene synthase. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.858 |
SDW36309.1 | SDW59457.1 | SAMN04488001_0984 | SAMN04488001_1285 | Phytoene synthase. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.927 |
SDW36309.1 | SDW67247.1 | SAMN04488001_0984 | SAMN04488001_1511 | Phytoene synthase. | Digeranylgeranylglycerophospholipid reductase. | 0.761 |
SDW36309.1 | SDW74031.1 | SAMN04488001_0984 | SAMN04488001_1684 | Phytoene synthase. | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.927 |
SDW36309.1 | SDX27066.1 | SAMN04488001_0984 | SAMN04488001_2817 | Phytoene synthase. | Geranylgeranyl reductase family. | 0.761 |
SDW36309.1 | dxs | SAMN04488001_0984 | SAMN04488001_1683 | Phytoene synthase. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.419 |
SDW36309.1 | idi | SAMN04488001_0984 | SAMN04488001_1718 | Phytoene synthase. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.754 |
SDW36309.1 | ispH | SAMN04488001_0984 | SAMN04488001_1257 | Phytoene synthase. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.447 |
SDW42952.1 | SDW36309.1 | SAMN04488001_1158 | SAMN04488001_0984 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Phytoene synthase. | 0.858 |
SDW42952.1 | SDW59457.1 | SAMN04488001_1158 | SAMN04488001_1285 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.923 |
SDW42952.1 | SDW74031.1 | SAMN04488001_1158 | SAMN04488001_1684 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.935 |
SDW42952.1 | idi | SAMN04488001_1158 | SAMN04488001_1718 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.661 |
SDW42952.1 | ispH | SAMN04488001_1158 | SAMN04488001_1257 | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.515 |
SDW59457.1 | SDW36309.1 | SAMN04488001_1285 | SAMN04488001_0984 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Phytoene synthase. | 0.927 |
SDW59457.1 | SDW42952.1 | SAMN04488001_1285 | SAMN04488001_1158 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.923 |
SDW59457.1 | SDW74031.1 | SAMN04488001_1285 | SAMN04488001_1684 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.871 |
SDW59457.1 | SDX27066.1 | SAMN04488001_1285 | SAMN04488001_2817 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Geranylgeranyl reductase family. | 0.413 |
SDW59457.1 | idi | SAMN04488001_1285 | SAMN04488001_1718 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.461 |
SDW59457.1 | ispH | SAMN04488001_1285 | SAMN04488001_1257 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.497 |
SDW59457.1 | xseB | SAMN04488001_1285 | SAMN04488001_1685 | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.532 |
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