STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW77816.1ABC-type polysaccharide/polyol phosphate export permease. (273 aa)    
Predicted Functional Partners:
SDW63145.1
Capsular polysaccharide transport system ATP-binding protein.
 
 0.994
SDX62541.1
Capsular polysaccharide transport system ATP-binding protein; Manually curated.
 
 0.983
SDW19269.1
Capsular polysaccharide export protein.
 
  
 0.944
SDW63114.1
Capsular polysaccharide transport system permease protein.
 
 
 0.933
SDX62515.1
Capsular polysaccharide transport system permease protein.
 
 
 0.843
SDW19304.1
Polysaccharide export outer membrane protein.
 
  
 0.816
SDW77533.1
Core-2/I-Branching enzyme.
 
     0.809
SDW19339.1
Capsular polysaccharide export protein.
 
   
 0.792
SDW77491.1
Hypothetical protein.
 
     0.776
SDX35867.1
Hypothetical protein.
 
     0.772
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.