STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW96969.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
SDW97031.1
Protein SCO1/2.
 
     0.873
SDW96998.1
Hypothetical protein.
       0.848
SDW97059.1
Rhodanese-related sulfurtransferase.
 
     0.819
SDW97301.1
Uncharacterized conserved protein, DUF302 family.
  
     0.689
SDW78894.1
Electron transfer DM13.
  
     0.678
SDX49580.1
Hypothetical protein.
  
     0.632
SDW24871.1
Ketosteroid isomerase-related protein.
  
     0.543
SDW97163.1
Hypothetical protein.
  
     0.531
SDW13262.1
Electron transfer DM13.
  
     0.520
SDW63813.1
Polyhydroxybutyrate depolymerase.
  
     0.520
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.