Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW18832.1 | SDW18866.1 | SAMN04488001_0506 | SAMN04488001_0507 | Sarcosine oxidase subunit beta. | Sarcosine oxidase subunit delta. | 0.987 |
SDW18832.1 | SDW18931.1 | SAMN04488001_0506 | SAMN04488001_0509 | Sarcosine oxidase subunit beta. | Sarcosine oxidase subunit gamma. | 0.956 |
SDW18832.1 | SDW97355.1 | SAMN04488001_0506 | SAMN04488001_2135 | Sarcosine oxidase subunit beta. | Sarcosine oxidase subunit gamma. | 0.864 |
SDW18832.1 | SDW97384.1 | SAMN04488001_0506 | SAMN04488001_2136 | Sarcosine oxidase subunit beta. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.992 |
SDW18832.1 | SDW97413.1 | SAMN04488001_0506 | SAMN04488001_2137 | Sarcosine oxidase subunit beta. | Sarcosine oxidase subunit delta. | 0.953 |
SDW18832.1 | SDX13241.1 | SAMN04488001_0506 | SAMN04488001_2462 | Sarcosine oxidase subunit beta. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.726 |
SDW18832.1 | SDX33780.1 | SAMN04488001_0506 | SAMN04488001_2950 | Sarcosine oxidase subunit beta. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.627 |
SDW18832.1 | SDX49159.1 | SAMN04488001_0506 | SAMN04488001_3348 | Sarcosine oxidase subunit beta. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.624 |
SDW18832.1 | gcvP | SAMN04488001_0506 | SAMN04488001_3221 | Sarcosine oxidase subunit beta. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.684 |
SDW18866.1 | SDW18832.1 | SAMN04488001_0507 | SAMN04488001_0506 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit beta. | 0.987 |
SDW18866.1 | SDW18931.1 | SAMN04488001_0507 | SAMN04488001_0509 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit gamma. | 0.999 |
SDW18866.1 | SDW97355.1 | SAMN04488001_0507 | SAMN04488001_2135 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit gamma. | 0.992 |
SDW18866.1 | SDW97384.1 | SAMN04488001_0507 | SAMN04488001_2136 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.998 |
SDW18866.1 | SDW97413.1 | SAMN04488001_0507 | SAMN04488001_2137 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit delta. | 0.950 |
SDW18866.1 | SDW97512.1 | SAMN04488001_0507 | SAMN04488001_2140 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit beta. | 0.947 |
SDW18866.1 | SDX13241.1 | SAMN04488001_0507 | SAMN04488001_2462 | Sarcosine oxidase subunit delta. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.989 |
SDW18866.1 | SDX33780.1 | SAMN04488001_0507 | SAMN04488001_2950 | Sarcosine oxidase subunit delta. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.990 |
SDW18866.1 | SDX49159.1 | SAMN04488001_0507 | SAMN04488001_3348 | Sarcosine oxidase subunit delta. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.990 |
SDW18931.1 | SDW18832.1 | SAMN04488001_0509 | SAMN04488001_0506 | Sarcosine oxidase subunit gamma. | Sarcosine oxidase subunit beta. | 0.956 |
SDW18931.1 | SDW18866.1 | SAMN04488001_0509 | SAMN04488001_0507 | Sarcosine oxidase subunit gamma. | Sarcosine oxidase subunit delta. | 0.999 |
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