STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX11582.1Haem-NO-binding. (200 aa)    
Predicted Functional Partners:
SDW68068.1
Flagellar basal-body rod protein FlgB.
   
    0.999
SDW73630.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
  
 0.999
SDX49011.1
Serine/threonine-protein kinase RsbW.
  
    0.999
SDX49034.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
    0.999
SDX11554.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  
 0.988
thiG
Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 0.976
SDW18730.1
Flp pilus assembly protein TadG.
   
    0.961
SDW68365.1
Rod binding protein.
   
    0.961
SDW73592.1
Hpt domain-containing protein.
 
    0.925
SDX00495.1
Sulfur carrier protein.
  
 
  0.879
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.