Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDW29182.1 | SDX14241.1 | SAMN04488001_0768 | SAMN04488001_2494 | Dihydroneopterin aldolase. | Uncharacterized protein involved in cysteine biosynthesis. | 0.460 |
| SDW34757.1 | SDX14241.1 | SAMN04488001_0928 | SAMN04488001_2494 | Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. | Uncharacterized protein involved in cysteine biosynthesis. | 0.434 |
| SDW81184.1 | SDX14241.1 | SAMN04488001_1877 | SAMN04488001_2494 | Hypothetical protein. | Uncharacterized protein involved in cysteine biosynthesis. | 0.556 |
| SDX14162.1 | SDX14190.1 | SAMN04488001_2491 | SAMN04488001_2492 | Hypothetical protein. | Glycerophosphoryl diester phosphodiesterase. | 0.605 |
| SDX14162.1 | SDX14213.1 | SAMN04488001_2491 | SAMN04488001_2493 | Hypothetical protein. | Nitroreductase. | 0.454 |
| SDX14162.1 | SDX14241.1 | SAMN04488001_2491 | SAMN04488001_2494 | Hypothetical protein. | Uncharacterized protein involved in cysteine biosynthesis. | 0.454 |
| SDX14162.1 | topA | SAMN04488001_2491 | SAMN04488001_2490 | Hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.773 |
| SDX14190.1 | SDX14162.1 | SAMN04488001_2492 | SAMN04488001_2491 | Glycerophosphoryl diester phosphodiesterase. | Hypothetical protein. | 0.605 |
| SDX14190.1 | SDX14213.1 | SAMN04488001_2492 | SAMN04488001_2493 | Glycerophosphoryl diester phosphodiesterase. | Nitroreductase. | 0.568 |
| SDX14190.1 | SDX14241.1 | SAMN04488001_2492 | SAMN04488001_2494 | Glycerophosphoryl diester phosphodiesterase. | Uncharacterized protein involved in cysteine biosynthesis. | 0.568 |
| SDX14190.1 | topA | SAMN04488001_2492 | SAMN04488001_2490 | Glycerophosphoryl diester phosphodiesterase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.605 |
| SDX14213.1 | SDX14162.1 | SAMN04488001_2493 | SAMN04488001_2491 | Nitroreductase. | Hypothetical protein. | 0.454 |
| SDX14213.1 | SDX14190.1 | SAMN04488001_2493 | SAMN04488001_2492 | Nitroreductase. | Glycerophosphoryl diester phosphodiesterase. | 0.568 |
| SDX14213.1 | SDX14241.1 | SAMN04488001_2493 | SAMN04488001_2494 | Nitroreductase. | Uncharacterized protein involved in cysteine biosynthesis. | 0.894 |
| SDX14213.1 | topA | SAMN04488001_2493 | SAMN04488001_2490 | Nitroreductase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.564 |
| SDX14241.1 | SDW29182.1 | SAMN04488001_2494 | SAMN04488001_0768 | Uncharacterized protein involved in cysteine biosynthesis. | Dihydroneopterin aldolase. | 0.460 |
| SDX14241.1 | SDW34757.1 | SAMN04488001_2494 | SAMN04488001_0928 | Uncharacterized protein involved in cysteine biosynthesis. | Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. | 0.434 |
| SDX14241.1 | SDW81184.1 | SAMN04488001_2494 | SAMN04488001_1877 | Uncharacterized protein involved in cysteine biosynthesis. | Hypothetical protein. | 0.556 |
| SDX14241.1 | SDX14162.1 | SAMN04488001_2494 | SAMN04488001_2491 | Uncharacterized protein involved in cysteine biosynthesis. | Hypothetical protein. | 0.454 |
| SDX14241.1 | SDX14190.1 | SAMN04488001_2494 | SAMN04488001_2492 | Uncharacterized protein involved in cysteine biosynthesis. | Glycerophosphoryl diester phosphodiesterase. | 0.568 |
page 1 of 2