Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW98126.1 | SDW99251.1 | SAMN04488001_2158 | SAMN04488001_2191 | Permease family protein. | Dihydroorotate oxidase B, catalytic subunit. | 0.770 |
SDW98126.1 | SDX09839.1 | SAMN04488001_2158 | SAMN04488001_2359 | Permease family protein. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.752 |
SDW98126.1 | SDX43077.1 | SAMN04488001_2158 | SAMN04488001_3201 | Permease family protein. | Dihydropyrimidinase. | 0.789 |
SDW98126.1 | SDX51263.1 | SAMN04488001_2158 | SAMN04488001_3425 | Permease family protein. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | 0.918 |
SDW98126.1 | carA | SAMN04488001_2158 | SAMN04488001_0780 | Permease family protein. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.915 |
SDW98126.1 | carB | SAMN04488001_2158 | SAMN04488001_2504 | Permease family protein. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.902 |
SDW98126.1 | pyrB | SAMN04488001_2158 | SAMN04488001_2866 | Permease family protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.958 |
SDW98126.1 | pyrE | SAMN04488001_2158 | SAMN04488001_2090 | Permease family protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.901 |
SDW99173.1 | SDW99251.1 | SAMN04488001_2189 | SAMN04488001_2191 | N-carbamoyl-L-amino-acid hydrolase. | Dihydroorotate oxidase B, catalytic subunit. | 0.956 |
SDW99173.1 | SDW99284.1 | SAMN04488001_2189 | SAMN04488001_2192 | N-carbamoyl-L-amino-acid hydrolase. | Glutamate synthase (NADPH/NADH) small chain. | 0.844 |
SDW99173.1 | SDX09839.1 | SAMN04488001_2189 | SAMN04488001_2359 | N-carbamoyl-L-amino-acid hydrolase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.481 |
SDW99173.1 | SDX43077.1 | SAMN04488001_2189 | SAMN04488001_3201 | N-carbamoyl-L-amino-acid hydrolase. | Dihydropyrimidinase. | 0.918 |
SDW99251.1 | SDW98126.1 | SAMN04488001_2191 | SAMN04488001_2158 | Dihydroorotate oxidase B, catalytic subunit. | Permease family protein. | 0.770 |
SDW99251.1 | SDW99173.1 | SAMN04488001_2191 | SAMN04488001_2189 | Dihydroorotate oxidase B, catalytic subunit. | N-carbamoyl-L-amino-acid hydrolase. | 0.956 |
SDW99251.1 | SDW99284.1 | SAMN04488001_2191 | SAMN04488001_2192 | Dihydroorotate oxidase B, catalytic subunit. | Glutamate synthase (NADPH/NADH) small chain. | 0.999 |
SDW99251.1 | SDX09839.1 | SAMN04488001_2191 | SAMN04488001_2359 | Dihydroorotate oxidase B, catalytic subunit. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.838 |
SDW99251.1 | SDX43077.1 | SAMN04488001_2191 | SAMN04488001_3201 | Dihydroorotate oxidase B, catalytic subunit. | Dihydropyrimidinase. | 0.976 |
SDW99251.1 | SDX51263.1 | SAMN04488001_2191 | SAMN04488001_3425 | Dihydroorotate oxidase B, catalytic subunit. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP). | 0.907 |
SDW99251.1 | carA | SAMN04488001_2191 | SAMN04488001_0780 | Dihydroorotate oxidase B, catalytic subunit. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.861 |
SDW99251.1 | carB | SAMN04488001_2191 | SAMN04488001_2504 | Dihydroorotate oxidase B, catalytic subunit. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.928 |
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