STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK56707.1Cbb3-type cytochrome oxidase, subunit CcoQ. (56 aa)    
Predicted Functional Partners:
AGK56708.1
Cbb3-type cytochrome oxidase, subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.961
AGK58646.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 
 0.958
AGK56706.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
  
 0.940
AGK56705.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.939
AGK57307.1
COG4736 Cbb3-type cytochrome oxidase, subunit 3.
     
  0.900
AGK57309.1
Cytochrome C oxidase accessory protein CcoG; COG0348 Polyferredoxin.
  
  
 0.865
AGK57308.1
Cytochrome C oxidase cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.837
AGK57306.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
  
 0.748
AGK57305.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.743
AGK58647.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1.
  
  
 0.743
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.