STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK56780.1COG2010 Cytochrome c, mono- and diheme variants. (150 aa)    
Predicted Functional Partners:
AGK56781.1
COG3256 Nitric oxide reductase large subunit; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
AGK56783.1
Von Willebrand factor A; COG4548 Nitric oxide reductase activation protein.
 
  
 0.983
nosZ
Nitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
 
 0.982
AGK56782.1
ATPase AAA; COG0714 MoxR-like ATPases.
 
  
 0.967
AGK56800.1
Nitrite reductase, copper-containing protein; COG2132 Putative multicopper oxidases; Belongs to the multicopper oxidase family.
  
 0.949
AGK56779.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
 
 0.921
AGK57507.1
Nitrous oxide expression regulator, NosR; COG3901 Regulator of nitric oxide reductase transcription.
 
  
 0.818
AGK57509.1
Periplasmic copper-binding protein; COG3420 Nitrous oxidase accessory protein.
 
  
 0.736
AGK58917.1
Ubiquinol-cytochrome C reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.708
AGK58916.1
Cytochrome b/b6 domain-containing protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.702
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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