STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK57116.1COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis. (729 aa)    
Predicted Functional Partners:
AGK57111.1
COG2132 Putative multicopper oxidases.
 
     0.802
AGK57113.1
COG3019 Predicted metal-binding protein.
 
     0.779
AGK57114.1
Hypothetical protein.
       0.773
AGK57115.1
Hypothetical protein.
       0.773
AGK57117.1
Methyltransferase; COG0500 SAM-dependent methyltransferases.
       0.773
AGK57118.1
Classical-complement-pathway C3/C5 convertase; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
       0.773
AGK57112.1
COG3474 Cytochrome c2.
       0.746
AGK57216.1
DSBA oxidoreductase; COG1651 Protein-disulfide isomerase.
 
 
 0.655
AGK57110.1
Hypothetical protein.
       0.615
AGK59262.1
DSBA oxidoreductase; COG1651 Protein-disulfide isomerase.
  
 
 0.599
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.