Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGK57229.1 | AGK57230.1 | HYPDE_27748 | HYPDE_27753 | Hypothetical protein. | Hypothetical protein; COG4692 Predicted neuraminidase (sialidase). | 0.773 |
AGK57229.1 | AGK57231.1 | HYPDE_27748 | HYPDE_27758 | Hypothetical protein. | COG1376 Uncharacterized protein conserved in bacteria. | 0.526 |
AGK57229.1 | AGK57232.1 | HYPDE_27748 | HYPDE_27763 | Hypothetical protein. | Hypothetical protein. | 0.402 |
AGK57230.1 | AGK57229.1 | HYPDE_27753 | HYPDE_27748 | Hypothetical protein; COG4692 Predicted neuraminidase (sialidase). | Hypothetical protein. | 0.773 |
AGK57230.1 | AGK57231.1 | HYPDE_27753 | HYPDE_27758 | Hypothetical protein; COG4692 Predicted neuraminidase (sialidase). | COG1376 Uncharacterized protein conserved in bacteria. | 0.526 |
AGK57230.1 | AGK57232.1 | HYPDE_27753 | HYPDE_27763 | Hypothetical protein; COG4692 Predicted neuraminidase (sialidase). | Hypothetical protein. | 0.402 |
AGK57231.1 | AGK57229.1 | HYPDE_27758 | HYPDE_27748 | COG1376 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.526 |
AGK57231.1 | AGK57230.1 | HYPDE_27758 | HYPDE_27753 | COG1376 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG4692 Predicted neuraminidase (sialidase). | 0.526 |
AGK57231.1 | AGK57232.1 | HYPDE_27758 | HYPDE_27763 | COG1376 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.572 |
AGK57232.1 | AGK57229.1 | HYPDE_27763 | HYPDE_27748 | Hypothetical protein. | Hypothetical protein. | 0.402 |
AGK57232.1 | AGK57230.1 | HYPDE_27763 | HYPDE_27753 | Hypothetical protein. | Hypothetical protein; COG4692 Predicted neuraminidase (sialidase). | 0.402 |
AGK57232.1 | AGK57231.1 | HYPDE_27763 | HYPDE_27758 | Hypothetical protein. | COG1376 Uncharacterized protein conserved in bacteria. | 0.572 |
AGK57232.1 | panB | HYPDE_27763 | HYPDE_27768 | Hypothetical protein. | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.440 |
panB | AGK57232.1 | HYPDE_27768 | HYPDE_27763 | 3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | Hypothetical protein. | 0.440 |