Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGK57515.1 | AGK57516.1 | HYPDE_29198 | HYPDE_29203 | COG4487 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants. | 0.570 |
AGK57515.1 | AGK57517.1 | HYPDE_29198 | HYPDE_29208 | COG4487 Uncharacterized protein conserved in bacteria. | Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component. | 0.555 |
AGK57515.1 | AGK57892.1 | HYPDE_29198 | HYPDE_31088 | COG4487 Uncharacterized protein conserved in bacteria. | Membrane transporter; COG1033 Predicted exporters of the RND superfamily. | 0.466 |
AGK57516.1 | AGK57515.1 | HYPDE_29203 | HYPDE_29198 | Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants. | COG4487 Uncharacterized protein conserved in bacteria. | 0.570 |
AGK57516.1 | AGK57517.1 | HYPDE_29203 | HYPDE_29208 | Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants. | Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component. | 0.752 |
AGK57517.1 | AGK57515.1 | HYPDE_29208 | HYPDE_29198 | Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component. | COG4487 Uncharacterized protein conserved in bacteria. | 0.555 |
AGK57517.1 | AGK57516.1 | HYPDE_29208 | HYPDE_29203 | Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component. | Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants. | 0.752 |
AGK57892.1 | AGK57515.1 | HYPDE_31088 | HYPDE_29198 | Membrane transporter; COG1033 Predicted exporters of the RND superfamily. | COG4487 Uncharacterized protein conserved in bacteria. | 0.466 |