STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGK57801.1Cobyrinic acid ac-diamide synthase; COG1192 ATPases involved in chromosome partitioning. (293 aa)    
Predicted Functional Partners:
AGK59624.1
parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
 
 0.886
AGK57802.1
Hypothetical protein.
       0.775
AGK57800.1
Hypothetical protein.
       0.773
AGK59774.1
COG1192 ATPases involved in chromosome partitioning.
  
     0.714
AGK57188.1
Partition protein; COG1192 ATPases involved in chromosome partitioning.
  
     0.702
AGK57799.1
Hypothetical protein.
       0.584
AGK59640.1
COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
  
 0.577
AGK57803.1
Hypothetical protein.
       0.543
AGK57201.1
ParB domain-containing protein nuclease; COG1475 Predicted transcriptional regulators.
  
 
 0.459
AGK59803.1
ParB domain-containing protein nuclease; COG1475 Predicted transcriptional regulators.
  
 
 0.459
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.