STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK58345.1NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes. (248 aa)    
Predicted Functional Partners:
nnrD
Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
  
 0.822
AGK58344.1
Phenazine biosynthesis protein PhzF family; COG0384 Predicted epimerase, PhzC/PhzF homolog.
       0.776
AGK58604.1
Hypothetical protein.
  
     0.759
AGK58428.1
Hypothetical protein; COG2363 Uncharacterized small membrane protein.
  
    0.732
AGK57709.1
Invasion associated locus B family protein.
  
   
 0.722
AGK57535.1
Sel1 domain-containing protein repeat-containing protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.680
AGK57769.1
Hypothetical protein.
  
     0.680
AGK59691.1
Hypothetical protein.
  
     0.674
AGK58573.1
Hypothetical protein; COG0802 Predicted ATPase or kinase.
 
   
 0.671
AGK56413.1
Ribonuclease BN; COG1295 Predicted membrane protein.
 
     0.646
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.