STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK58787.1Metallophosphoesterase; COG1409 Predicted phosphohydrolases. (301 aa)    
Predicted Functional Partners:
AGK58125.1
Hypothetical protein.
  
     0.672
AGK58879.1
Flagellar export protein FliJ.
  
     0.654
AGK59290.1
Invasion associated locus B family protein.
  
     0.652
AGK58788.1
NUDIX hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
 
     0.627
AGK56257.1
COG4391 Uncharacterized protein conserved in bacteria.
  
     0.609
AGK57832.1
Transglutaminase; COG3672 Predicted periplasmic protein.
  
     0.604
AGK57535.1
Sel1 domain-containing protein repeat-containing protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
    0.586
AGK57612.1
GAF sensor hybrid histidine kinase; COG2770 FOG: HAMP domain.
  
  
 0.557
AGK56258.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.551
AGK58800.1
Porin opacity type; COG3637 Opacity protein and related surface antigens.
  
     0.496
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.