STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGK58998.1MaoC domain-containing protein dehydratase; COG2030 Acyl dehydratase. (145 aa)    
Predicted Functional Partners:
AGK58004.1
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.968
AGK57645.1
poly(R)-hydroxyalkanoic acid synthase; COG3243 Poly(3-hydroxyalkanoate) synthetase.
 
  
 0.941
AGK56810.1
Poly-beta-hydroxyalkanoate synthase (phbC); COG3243 Poly(3-hydroxyalkanoate) synthetase.
 
  
 0.940
AGK56535.1
COG3243 Poly(3-hydroxyalkanoate) synthetase.
 
  
 0.939
AGK56414.1
COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
 0.937
AGK59194.1
acetoacetyl-CoA reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 0.933
AGK59535.1
Phosphate acetyltransferase; COG0280 Phosphotransacetylase.
 
   
 0.926
AGK58997.1
Riboflavin biosynthesis protein RibF; COG0196 FAD synthase; Belongs to the ribF family.
       0.680
AGK56411.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.649
AGK56718.1
Catalase related subgroup; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.623
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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