Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGK59086.1 | AGK59087.1 | HYPDE_37073 | HYPDE_37078 | Two-component response regulator; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.903 |
AGK59086.1 | AGK59088.1 | HYPDE_37073 | HYPDE_37083 | Two-component response regulator; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | Hypothetical protein. | 0.572 |
AGK59087.1 | AGK59086.1 | HYPDE_37078 | HYPDE_37073 | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Two-component response regulator; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | 0.903 |
AGK59087.1 | AGK59088.1 | HYPDE_37078 | HYPDE_37083 | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.773 |
AGK59087.1 | AGK59090.1 | HYPDE_37078 | HYPDE_37093 | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | COG2875 Precorrin-4 methylase; Belongs to the precorrin methyltransferase family. | 0.462 |
AGK59087.1 | AGK59091.1 | HYPDE_37078 | HYPDE_37098 | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Precorrin methylase. | 0.462 |
AGK59087.1 | AGK59092.1 | HYPDE_37078 | HYPDE_37103 | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Precorrin-6y C5,15-methyltransferase subunit CbiE; COG2241 Precorrin-6B methylase 1. | 0.462 |
AGK59087.1 | cobB | HYPDE_37078 | HYPDE_37088 | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.462 |
AGK59088.1 | AGK59086.1 | HYPDE_37083 | HYPDE_37073 | Hypothetical protein. | Two-component response regulator; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog. | 0.572 |
AGK59088.1 | AGK59087.1 | HYPDE_37083 | HYPDE_37078 | Hypothetical protein. | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
AGK59088.1 | AGK59090.1 | HYPDE_37083 | HYPDE_37093 | Hypothetical protein. | COG2875 Precorrin-4 methylase; Belongs to the precorrin methyltransferase family. | 0.462 |
AGK59088.1 | AGK59091.1 | HYPDE_37083 | HYPDE_37098 | Hypothetical protein. | Precorrin methylase. | 0.462 |
AGK59088.1 | AGK59092.1 | HYPDE_37083 | HYPDE_37103 | Hypothetical protein. | Precorrin-6y C5,15-methyltransferase subunit CbiE; COG2241 Precorrin-6B methylase 1. | 0.462 |
AGK59088.1 | cobB | HYPDE_37083 | HYPDE_37088 | Hypothetical protein. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.462 |
AGK59090.1 | AGK59087.1 | HYPDE_37093 | HYPDE_37078 | COG2875 Precorrin-4 methylase; Belongs to the precorrin methyltransferase family. | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.462 |
AGK59090.1 | AGK59088.1 | HYPDE_37093 | HYPDE_37083 | COG2875 Precorrin-4 methylase; Belongs to the precorrin methyltransferase family. | Hypothetical protein. | 0.462 |
AGK59090.1 | AGK59091.1 | HYPDE_37093 | HYPDE_37098 | COG2875 Precorrin-4 methylase; Belongs to the precorrin methyltransferase family. | Precorrin methylase. | 0.976 |
AGK59090.1 | AGK59092.1 | HYPDE_37093 | HYPDE_37103 | COG2875 Precorrin-4 methylase; Belongs to the precorrin methyltransferase family. | Precorrin-6y C5,15-methyltransferase subunit CbiE; COG2241 Precorrin-6B methylase 1. | 0.998 |
AGK59090.1 | cobB | HYPDE_37093 | HYPDE_37088 | COG2875 Precorrin-4 methylase; Belongs to the precorrin methyltransferase family. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.977 |
AGK59091.1 | AGK59087.1 | HYPDE_37098 | HYPDE_37078 | Precorrin methylase. | COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.462 |
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