STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK59413.1Surface presentation of antigens (SPOA) protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (140 aa)    
Predicted Functional Partners:
AGK59412.1
COG1536 Flagellar motor switch protein.
 
 0.999
AGK59414.1
COG1868 Flagellar motor switch protein.
 
 0.999
fliI
Flagellum-specific ATP synthase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
 
 0.993
flgC
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.991
flhB
COG1377 Flagellar biosynthesis pathway, component FlhB.
 
  
 0.991
flgG
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.988
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.987
fliF
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.983
flgE
COG1749 Flagellar hook protein FlgE.
 
  
 0.978
fliQ
COG1987 Flagellar biosynthesis pathway, component FliQ.
 
  
 0.977
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.