STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK59420.1Signal transduction protein with CBS domains; COG0637 Predicted phosphatase/phosphohexomutase. (417 aa)    
Predicted Functional Partners:
AGK56872.1
Signal transduction protein with CBS domains; COG0517 FOG: CBS domain.
  
     0.750
AGK56338.1
Hypothetical protein; COG0517 FOG: CBS domain.
 
     0.716
AGK58317.1
Hypothetical protein; COG0517 FOG: CBS domain.
 
     0.639
AGK59419.1
Glycoside hydrolase family 24; COG3772 Phage-related lysozyme (muraminidase).
       0.594
AGK59610.1
PEP synthetase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
  
  
 0.490
AGK59421.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.465
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.