STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK59527.1Hypothetical protein. (442 aa)    
Predicted Functional Partners:
AGK59528.1
Hypothetical protein.
 
   
 0.938
AGK59529.1
Periplasmic protein-like protein.
       0.604
AGK59640.1
COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
   
 
 0.596
AGK58629.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.559
AGK57612.1
GAF sensor hybrid histidine kinase; COG2770 FOG: HAMP domain.
   
 
 0.473
AGK59523.1
Hypothetical protein; COG0628 Predicted permease.
 
     0.457
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.