Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGK59612.1 | AGK59613.1 | HYPDE_39718 | HYPDE_39723 | COG1981 Predicted membrane protein. | Histone H1. | 0.594 |
AGK59612.1 | AGK59614.1 | HYPDE_39718 | HYPDE_39728 | COG1981 Predicted membrane protein. | Hypothetical protein; COG0616 Periplasmic serine proteases (ClpP class). | 0.594 |
AGK59612.1 | AGK59615.1 | HYPDE_39718 | HYPDE_39733 | COG1981 Predicted membrane protein. | Hypothetical protein. | 0.594 |
AGK59612.1 | AGK59616.1 | HYPDE_39718 | HYPDE_39738 | COG1981 Predicted membrane protein. | IS1 transposase. | 0.412 |
AGK59612.1 | hemE | HYPDE_39718 | HYPDE_39713 | COG1981 Predicted membrane protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.889 |
AGK59613.1 | AGK59612.1 | HYPDE_39723 | HYPDE_39718 | Histone H1. | COG1981 Predicted membrane protein. | 0.594 |
AGK59613.1 | AGK59614.1 | HYPDE_39723 | HYPDE_39728 | Histone H1. | Hypothetical protein; COG0616 Periplasmic serine proteases (ClpP class). | 0.773 |
AGK59613.1 | AGK59615.1 | HYPDE_39723 | HYPDE_39733 | Histone H1. | Hypothetical protein. | 0.773 |
AGK59613.1 | AGK59616.1 | HYPDE_39723 | HYPDE_39738 | Histone H1. | IS1 transposase. | 0.520 |
AGK59613.1 | hemE | HYPDE_39723 | HYPDE_39713 | Histone H1. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.575 |
AGK59614.1 | AGK59612.1 | HYPDE_39728 | HYPDE_39718 | Hypothetical protein; COG0616 Periplasmic serine proteases (ClpP class). | COG1981 Predicted membrane protein. | 0.594 |
AGK59614.1 | AGK59613.1 | HYPDE_39728 | HYPDE_39723 | Hypothetical protein; COG0616 Periplasmic serine proteases (ClpP class). | Histone H1. | 0.773 |
AGK59614.1 | AGK59615.1 | HYPDE_39728 | HYPDE_39733 | Hypothetical protein; COG0616 Periplasmic serine proteases (ClpP class). | Hypothetical protein. | 0.773 |
AGK59614.1 | AGK59616.1 | HYPDE_39728 | HYPDE_39738 | Hypothetical protein; COG0616 Periplasmic serine proteases (ClpP class). | IS1 transposase. | 0.520 |
AGK59614.1 | hemE | HYPDE_39728 | HYPDE_39713 | Hypothetical protein; COG0616 Periplasmic serine proteases (ClpP class). | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.575 |
AGK59615.1 | AGK59612.1 | HYPDE_39733 | HYPDE_39718 | Hypothetical protein. | COG1981 Predicted membrane protein. | 0.594 |
AGK59615.1 | AGK59613.1 | HYPDE_39733 | HYPDE_39723 | Hypothetical protein. | Histone H1. | 0.773 |
AGK59615.1 | AGK59614.1 | HYPDE_39733 | HYPDE_39728 | Hypothetical protein. | Hypothetical protein; COG0616 Periplasmic serine proteases (ClpP class). | 0.773 |
AGK59615.1 | AGK59616.1 | HYPDE_39733 | HYPDE_39738 | Hypothetical protein. | IS1 transposase. | 0.520 |
AGK59615.1 | hemE | HYPDE_39733 | HYPDE_39713 | Hypothetical protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.575 |
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