STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK59675.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
AGK59676.1
TOBE domain-containing protein; COG3585 Molybdopterin-binding protein.
       0.785
AGK59677.1
N-carbamoylputrescine amidase; COG0388 Predicted amidohydrolase.
       0.668
AGK59678.1
COG2957 Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family.
       0.668
AGK59674.1
Peptidase M50; COG1994 Zn-dependent proteases.
       0.603
AGK59679.1
Hypothetical protein.
       0.466
Your Current Organism:
Hyphomicrobium denitrificans 1NES1
NCBI taxonomy Id: 670307
Other names: H. denitrificans 1NES1, Hyphomicrobium denitrificans str. 1NES1, Hyphomicrobium denitrificans strain 1NES1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.