STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_00094Integrase catalytic domain-containing protein. (417 aa)    
Predicted Functional Partners:
PPL_10132
Uncharacterized protein.
    
 0.935
lin9
RmlC-like cupin family protein.
    
 0.537
PPL_10499
Polyprotein.
 
     0.536
PPL_10735
Reverse transcriptase.
 
     0.535
PPL_11582
Pol polyprotein.
 
     0.535
PPL_02441
Uncharacterized protein.
  
     0.528
PPL_02018
Uncharacterized protein.
  
     0.525
PPL_01079
CRC domain-containing protein.
    
 0.523
PPL_12636
WD_REPEATS_REGION domain-containing protein.
    
 0.520
PPL_00926
Glucose-methanol-choline oxidoreductase; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.497
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.