STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
med26Uncharacterized protein. (2033 aa)    
Predicted Functional Partners:
PPL_08213
Bromodomain-containing protein.
   
 0.999
snf12-2
CHC group protein.
   
 0.752
arpD
Actin-like protein 6A; Belongs to the actin family.
    
 0.752
PPL_01137
SNF2-related domain-containing protein.
  
  
0.705
mybH
Myb domain-containing protein.
    
 0.687
PPL_03583
Myb domain-containing protein.
    
 0.642
mybX
Myb domain-containing protein.
    
 0.642
PPL_03972
Adenylate kinase.
    
 0.611
PPL_05544
PB1 domain-containing protein.
    
 0.611
PPL_10781
CHE group protein.
    
 0.611
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.