gbpD protein (Heterostelium album) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

gbpD

RasGEF domain-containing protein. (1168 aa)

Predicted Functional Partners:

pdeE

0.605

PPL_00339

0.472

rasB

0.446

rapA

0.446

rasC

0.446

PPL_02606

0.438

spg1

0.424

rasS

0.422

PPL_04786

0.413

rasG

0.413

Your Current Organism:

Heterostelium album

NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PPL_00339	PPL_02606	D3AW67	D3B2J3	Uncharacterized protein.	Uncharacterized protein.	0.894
PPL_00339	gbpD	D3AW67	D3AWQ7	Uncharacterized protein.	RasGEF domain-containing protein.	0.472
PPL_00339	pdeE	D3AW67	D3B4A9	Uncharacterized protein.	cAMP/cGMP-stimulated cAMP/cGMP phosphodiesterase.	0.421
PPL_02606	PPL_00339	D3B2J3	D3AW67	Uncharacterized protein.	Uncharacterized protein.	0.894
PPL_02606	PPL_04786	D3B2J3	D3B8J3	Uncharacterized protein.	Uncharacterized protein.	0.894
PPL_02606	gbpD	D3B2J3	D3AWQ7	Uncharacterized protein.	RasGEF domain-containing protein.	0.438
PPL_02606	rapA	D3B2J3	D3BH94	Uncharacterized protein.	Ras GTPase.	0.894
PPL_02606	rasB	D3B2J3	D3B5I9	Uncharacterized protein.	Ras GTPase.	0.894
PPL_02606	rasC	D3B2J3	D3BPK6	Uncharacterized protein.	Ras GTPase.	0.894
PPL_02606	rasG	D3B2J3	D3BC33	Uncharacterized protein.	Ras GTPase.	0.894
PPL_02606	rasS	D3B2J3	D3BQG2	Uncharacterized protein.	Ras GTPase.	0.894
PPL_02606	spg1	D3B2J3	D3BQR0	Uncharacterized protein.	Small GTPase.	0.894
PPL_04786	PPL_02606	D3B8J3	D3B2J3	Uncharacterized protein.	Uncharacterized protein.	0.894
PPL_04786	gbpD	D3B8J3	D3AWQ7	Uncharacterized protein.	RasGEF domain-containing protein.	0.413
PPL_04786	pdeE	D3B8J3	D3B4A9	Uncharacterized protein.	cAMP/cGMP-stimulated cAMP/cGMP phosphodiesterase.	0.421
gbpD	PPL_00339	D3AWQ7	D3AW67	RasGEF domain-containing protein.	Uncharacterized protein.	0.472
gbpD	PPL_02606	D3AWQ7	D3B2J3	RasGEF domain-containing protein.	Uncharacterized protein.	0.438
gbpD	PPL_04786	D3AWQ7	D3B8J3	RasGEF domain-containing protein.	Uncharacterized protein.	0.413
gbpD	pdeE	D3AWQ7	D3B4A9	RasGEF domain-containing protein.	cAMP/cGMP-stimulated cAMP/cGMP phosphodiesterase.	0.605
gbpD	rapA	D3AWQ7	D3BH94	RasGEF domain-containing protein.	Ras GTPase.	0.446