STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_00813RGS domain-containing protein. (154 aa)    
Predicted Functional Partners:
gpbA
G protein b-subunit.
   
 0.930
glkA
Protein kinase domain-containing protein.
    
 0.872
gskA
Glycogen synthase kinase 3.
    
 0.872
PPL_08205
Uncharacterized protein.
    
 0.799
PPL_11713
Uncharacterized protein.
   
 0.799
gbqA
G-protein alpha subunit family protein.
    
 0.789
PPL_09972
Hemolysin III.
      
 0.673
gpaC
G-protein subunit alpha 3.
   
 0.646
gpaH
G-protein subunit alpha 8.
   
 0.646
gpaL
G-protein subunit alpha 12.
   
 0.646
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.