Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PPL_00813 | fscH | D3AXI2 | D3BU13 | RGS domain-containing protein. | G-protein-coupled receptor family protein. | 0.503 |
PPL_00813 | gpaH | D3AXI2 | D3AYH4 | RGS domain-containing protein. | G-protein subunit alpha 8. | 0.646 |
PPL_00813 | gpbA | D3AXI2 | D3BQ34 | RGS domain-containing protein. | G protein b-subunit. | 0.930 |
PPL_00813 | lrlA | D3AXI2 | D3B489 | RGS domain-containing protein. | G-protein-coupled receptor family protein. | 0.503 |
PPL_05997 | fscH | D3BBX7 | D3BU13 | RGS domain-containing protein. | G-protein-coupled receptor family protein. | 0.503 |
PPL_05997 | gpaH | D3BBX7 | D3AYH4 | RGS domain-containing protein. | G-protein subunit alpha 8. | 0.646 |
PPL_05997 | gpbA | D3BBX7 | D3BQ34 | RGS domain-containing protein. | G protein b-subunit. | 0.930 |
PPL_05997 | lrlA | D3BBX7 | D3B489 | RGS domain-containing protein. | G-protein-coupled receptor family protein. | 0.503 |
PPL_08262 | fscH | D3BHP9 | D3BU13 | Uncharacterized protein. | G-protein-coupled receptor family protein. | 0.503 |
PPL_08262 | gpaH | D3BHP9 | D3AYH4 | Uncharacterized protein. | G-protein subunit alpha 8. | 0.646 |
PPL_08262 | gpbA | D3BHP9 | D3BQ34 | Uncharacterized protein. | G protein b-subunit. | 0.930 |
PPL_08262 | lrlA | D3BHP9 | D3B489 | Uncharacterized protein. | G-protein-coupled receptor family protein. | 0.503 |
acaA | gpaH | D3B043 | D3AYH4 | Adenylyl cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | G-protein subunit alpha 8. | 0.521 |
acaA | gpbA | D3B043 | D3BQ34 | Adenylyl cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. | G protein b-subunit. | 0.546 |
aprA | cfaD | D3BSH8 | D3BCE4 | PhoPQ-activated pathogenicity-related protein. | Counting factor associated protein; Belongs to the peptidase C1 family. | 0.685 |
aprA | gpaH | D3BSH8 | D3AYH4 | PhoPQ-activated pathogenicity-related protein. | G-protein subunit alpha 8. | 0.675 |
aprA | pakD | D3BSH8 | D3B5B7 | PhoPQ-activated pathogenicity-related protein. | Non-specific serine/threonine protein kinase. | 0.607 |
cfaD | aprA | D3BCE4 | D3BSH8 | Counting factor associated protein; Belongs to the peptidase C1 family. | PhoPQ-activated pathogenicity-related protein. | 0.685 |
cfaD | gpaH | D3BCE4 | D3AYH4 | Counting factor associated protein; Belongs to the peptidase C1 family. | G-protein subunit alpha 8. | 0.605 |
fscH | PPL_00813 | D3BU13 | D3AXI2 | G-protein-coupled receptor family protein. | RGS domain-containing protein. | 0.503 |
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