STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
culECullin E; Belongs to the cullin family. (763 aa)    
Predicted Functional Partners:
PPL_01872
Uncharacterized protein.
    
 0.998
rbx1
Putative RING box protein.
    
 0.969
cand1
HEAT repeat-containing protein.
   
 0.966
culB
Cullin B; Belongs to the cullin family.
  
  
 
0.886
culA
Cullin A; Belongs to the cullin family.
  
  
 
0.884
ube1c
Ubiquitin-activating enzyme E1C.
   
 0.875
ube2m
Ubiquitin-conjugating enzyme E2 M; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.874
CSN5
Mov34/MPN/PAD-1 family protein.
    
 0.852
PPL_07113
Putative transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
   
 0.850
CSN1
COP9 signalosome complex subunit 1.
    
 0.848
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.