STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_02238Letm1 RBD domain-containing protein. (592 aa)    
Predicted Functional Partners:
rpl8
60S ribosomal protein L8.
    
 
 0.569
rps14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
   0.557
rpsA
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.557
rps18
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
   0.548
rps9
Ribosomal protein 1024; Belongs to the universal ribosomal protein uS4 family.
    
   0.548
rpl23
S60 ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
   0.548
PPL_10534
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
    
   0.548
rpl11
S60 ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
   0.548
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.497
mrpl22
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.493
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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