STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stlAPutative polyketide synthase. (3026 aa)    
Predicted Functional Partners:
PPL_08951
Carrier domain-containing protein.
 
 0.688
PPL_07950
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
   
 0.648
PPL_02900
PKS_AT domain-containing protein.
 
0.568
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.491
PPL_02707
Putative ATP citrate synthase.
   
 0.484
acly
ATP citrate synthase.
   
 0.484
PPL_00383
PKS_ER domain-containing protein.
   
0.476
PPL_03395
Zinc-containing alcohol dehydrogenase.
   
0.476
PPL_09284
Putative quinone oxidoreductase.
   
0.476
PPL_12334
Zinc-containing alcohol dehydrogenase.
   
 0.476
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.