STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_03182C-type lectin domain-containing protein. (1473 aa)    
Predicted Functional Partners:
pldG
Glycosylphosphatidylinositol phospholipase D.
    
 0.689
PPL_05745
Uncharacterized protein.
    
 0.651
PPL_08494
Uncharacterized protein.
    
0.651
PPL_08639
Uncharacterized protein.
    
 0.651
PPL_12136
EGF-like domain-containing protein.
    
0.651
PPL_02606
Uncharacterized protein.
    
 0.628
PPL_08880
Uncharacterized protein.
    
 0.595
PPL_07898
Uncharacterized protein.
   
 0.553
frmA
FERM domain-containing protein.
   
0.553
talB
TalinB.
   
 0.553
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.