STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_03298Pleckstrin domain-containing protein. (806 aa)    
Predicted Functional Partners:
PPL_08449
LIM zinc-binding domain-containing protein.
    
 0.907
PPL_11468
Uncharacterized protein.
    
 0.907
PPL_02606
Uncharacterized protein.
   
 0.894
PPL_07741
Peptidase C53 family protein.
    
 0.689
docC
DOCK family protein; Belongs to the DOCK family.
    
 0.686
PPL_08874
RapGAP/RanGAP domain-containing protein.
    
 0.642
rplP0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
    
 
 0.603
PPL_04048
Galactose-binding domain-containing protein.
   
 0.593
mekA
MAP kinase kinase.
    
 0.589
PPL_08205
Uncharacterized protein.
   
  0.585
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.