STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bub2RabGAP/TBC domain-containing protein. (366 aa)    
Predicted Functional Partners:
spg1
Small GTPase.
  
 0.903
plk
Serine/threonine-protein kinase PLK.
    
 0.807
PPL_10421
Uncharacterized protein.
    
 0.737
PPL_07613
DUF1740 family protein.
    
 0.696
anapc6
TPR repeat-containing protein.
      
 0.685
ddi1
Ubiquitin-associated domain-containing protein.
    
 
 0.580
PPL_00836
Uncharacterized protein.
   
 0.566
PPL_06633
B box-type domain-containing protein.
    
 0.556
pter
Phosphotriesterase-related protein.
    
 0.556
rab8B
Rab GTPase.
    
 0.556
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.