STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_03973Uncharacterized protein. (785 aa)    
Predicted Functional Partners:
PPL_04282
Uncharacterized protein.
    
 0.673
PPL_01732
Uncharacterized protein.
    
 0.559
PPL_03818
PlsC domain-containing protein.
    
 0.511
arpB
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 0.481
PPL_03136
DUSP domain-containing protein.
    
 0.454
arpC
Actin-like protein; Belongs to the actin family.
    
 0.448
cenB
Centrin.
    
 0.444
PPL_00760
LNS2 domain-containing protein.
    
 0.439
PPL_03346
Putative lysophosphatidic acid acyltransferase.
    
 0.438
PPL_07277
PlsC domain-containing protein.
    
 0.438
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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