STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_03988FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family. (481 aa)    
Predicted Functional Partners:
PPL_04282
Uncharacterized protein.
    
 0.966
PPL_09856
Cytochrome b5 reductase.
    
 0.879
PPL_08344
EGF_2 domain-containing protein.
    
 0.674
PPL_10910
Uncharacterized protein.
   
  0.616
rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.559
rps6
40S ribosomal protein S6.
   
  0.558
utp20
HEAT repeat-containing protein.
   
  0.557
utp5
WD40 repeat-containing protein.
   
 0.549
fcf1
FCF1 family protein.
    
  0.541
PPL_03848
CBF domain-containing protein.
    
  0.541
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.