STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_04343Uncharacterized protein. (665 aa)    
Predicted Functional Partners:
PPL_02606
Uncharacterized protein.
   
 0.891
PPL_09856
Cytochrome b5 reductase.
    
 0.867
rps14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.572
mapbpip
Putative mitogen-activated protein binding protein interacting protein.
    
 0.572
rpsA
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.571
PPL_05621
Uncharacterized protein.
   
  0.555
PPL_11233
30S ribosomal protein S9.
    
  0.553
rps23
40S ribosomal protein S23.
    
 0.553
rps5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
    
 0.549
PPL_05303
MRP-S28 domain-containing protein.
    
  0.546
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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