STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_04560Uncharacterized protein. (600 aa)    
Predicted Functional Partners:
cstf3
Cleavage stimulation factor subunit 3.
   
 0.949
cstf1
WD40 repeat-containing protein.
    
 0.948
fip1l1
Cleavage and polyadenylation specificity factor FIP1.
   
 0.947
sympk
Symplekin.
   
 0.941
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.931
cpsf1
CPSF domain-containing protein.
   
 0.930
papA
PolyA polymerase.
    
 0.912
pcf11
ENTH domain-containing protein.
    
 0.894
clp1
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
   
 0.868
PPL_07077
Beta-lactamase domain-containing protein.
   
 0.846
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.