STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpsn2Synaptic glycoprotein SC2-like protein. (280 aa)    
Predicted Functional Partners:
PPL_07724
Uncharacterized protein.
   
 0.996
PPL_08664
Delta 9 fatty acid desaturase.
     
 0.994
PPL_11305
Delta 9 fatty acid desaturase.
     
 0.994
PPL_07064
Steroid dehydrogenase-like protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.984
PPL_10402
Uncharacterized protein.
   
 0.963
PPL_03782
Elongation of fatty acids protein.
    
 0.937
PPL_05060
Elongation of fatty acids protein.
    
 0.896
PPL_04100
Uncharacterized protein.
   
 0.890
PPL_09800
Uncharacterized protein.
   
 0.890
fadA
Delta 5 fatty acid desaturase.
     
 0.770
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.