STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_06313UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (360 aa)    
Predicted Functional Partners:
PPL_02797
Uncharacterized protein.
  
 
 0.980
ugpB
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.899
PPL_02104
ATP-grasp domain-containing protein.
  
 0.898
galK
Galactokinase.
  
 0.898
uppA
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.895
gtr3
Putative glycosyltransferase.
     
 0.857
PPL_00613
Beta-mannosidase-like protein.
  
 
 0.727
PPL_07084
Putative oxidoreductase.
  
 
 0.724
hemG
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
    
  0.705
uap1
UDP-N-acetylglucosamine pyrophosphorylase.
    
 0.682
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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