STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_06421Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (193 aa)    
Predicted Functional Partners:
mrpl15
Ribosomal protein L15.
   
 
 0.801
PPL_03137
50S ribosomal protein L13.
  
 
 0.789
PPL_07986
Uncharacterized protein.
   
   0.787
mrpl3
Ribosomal protein L3.
   
 
 0.785
psmG1
Proteasome assembly chaperone 1.
   
 
 0.784
mrps17
Ribosomal protein S17.
   
 
 0.780
PPL_12546
Uncharacterized protein.
   
 
 0.778
PPL_08688
Uncharacterized protein.
   
 
 0.758
PPL_02379
S5 DRBM domain-containing protein.
   
 
 0.750
rpl23
S60 ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.749
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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