STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_06908Uncharacterized protein; Belongs to the GST superfamily. (245 aa)    
Predicted Functional Partners:
metS
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.904
efa1B
Elongation factor 1b; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.723
PPL_08792
Elongation factor 1b-related protein.
   
 0.723
rpb3
RNA polymerase II core subunit.
   
 
 0.583
rpa5
RNA polymerase III subunit.
   
 
 0.583
gluS
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.573
efaAI
Elongation factor 1 alpha.
   
 0.568
PPL_08282
Elongation factor EF1 alpha.
   
 0.568
PPL_09814
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.568
PPL_09825
Uncharacterized protein.
   
 0.568
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.