STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_07043Cyclin-like F-box containing protein. (442 aa)    
Predicted Functional Partners:
dimt1l
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.744
PPL_11547
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.744
PPL_02203
Uncharacterized protein; Belongs to the SKP1 family.
    
 
 0.627
fpaA
Cytosolic glycoprotein FP21; Belongs to the SKP1 family.
    
 
 0.627
PPL_06190
Uncharacterized protein.
    
 
 0.627
canA
Serine/threonine-protein phosphatase.
  
  
 0.580
ppp6C
Serine/threonine-protein phosphatase.
  
  
 0.580
PPL_03908
Serine/threonine-protein phosphatase.
  
  
 0.580
pppB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 0.580
pho2A
Serine/threonine-protein phosphatase.
  
  
 0.580
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.