STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ifkCUncharacterized protein. (1585 aa)    
Predicted Functional Partners:
eIF2s1
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.976
ifkA
Eukaryotic translation initiation factor 2 alpha kinase.
     
0.860
maspS
Aspartyl-tRNA synthetase.
  
  
 0.636
mhisS
Histidine-tRNA ligase.
     
 0.613
eIF2s2
Eukaryotic translation initiation factor 2 subunit 2.
   
 0.587
eif2G
Translation initiation factor 2 gamma.
   
 0.583
PPL_04959
Uncharacterized protein.
   
 0.583
argC
Acetylglutamate kinase.
  
  
 0.552
eIF2b1
Translation initiation factor eIF-2B alpha subunit; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 
 0.501
PPL_11267
Selenocysteine-specific elongation factor.
   
 0.487
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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