STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_07514Ankyrin containing protein. (1298 aa)    
Predicted Functional Partners:
PPL_02606
Uncharacterized protein.
    
 0.564
uch2
Ubiquitin carboxyl-terminal hydrolase.
    
  0.494
PPL_04282
Uncharacterized protein.
    
 0.486
mhkC
Myosin heavy chain kinase.
    
 0.478
PPL_05908
Uncharacterized protein.
    
 0.478
PPL_09528
WD_REPEATS_REGION domain-containing protein.
    
 0.478
ppp6C
Serine/threonine-protein phosphatase.
    
  0.456
PPL_01732
Uncharacterized protein.
    
 0.453
psmC6
26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.
   
  0.425
PPL_07113
Putative transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
   
  0.420
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.