STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_08319KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family. (164 aa)    
Predicted Functional Partners:
PPL_12436
Uncharacterized protein.
   
 
 0.830
PPL_12546
Uncharacterized protein.
   
   0.807
mrpl3
Ribosomal protein L3.
   
   0.803
PPL_05621
Uncharacterized protein.
   
   0.776
PPL_12207
Uncharacterized protein.
   
 
 0.776
PPL_07147
Uncharacterized protein.
   
 
 0.774
mrpl22
Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.770
PPL_03137
50S ribosomal protein L13.
   
 
 0.766
PPL_07986
Uncharacterized protein.
   
 
 0.765
PPL_10557
Uncharacterized protein.
   
 
 0.764
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.