STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_08355Glyco_hydro_18 domain-containing protein. (310 aa)    
Predicted Functional Partners:
cxeA
Cytochrome c oxidase subunit V.
   
 0.617
PPL_01136
Cytochrome c oxidase subunit VIb.
   
 0.597
bzpP
Putative basic-leucine zipper transcription factor.
   
 0.507
PPL_02255
Uncharacterized protein.
   
 0.507
dimB
Putative basic-leucine zipper transcription factor.
   
 0.507
mppB
Mitochondrial processing peptidase beta subunit; Belongs to the peptidase M16 family.
    
 0.445
cyc1
Cytochrome c1.
   
 0.416
mppA
Mitochondrial processing peptidase alpha subunit.
    
 0.400
PPL_04381
Peptidase M16 family protein.
    
 0.400
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.